library(hash)
library(stringi)
simplifyposteriors<-function(X,posteriors,th=0.0001,thf=0.5)
{
posteriors<-posteriors[-which(posteriors[,2]<th),]
rhash<-hash()
for(i in 1:length(posteriors[,1]))
{
expr<-posteriors[i,1]
print(expr)
res<-model.matrix(data=X,object = as.formula(paste0("Y1~",expr)))
res[,1]<-res[,1]-res[,2]
ress<-c(stri_flatten(res[,1],collapse = ""),stri_flatten(res[,2],collapse = ""),posteriors[i,2],expr)
if(!(ress[1] %in% values(rhash)||(ress[2] %in% values(rhash))))
rhash[[ress[1]]]<-ress
else
{
if(ress[1] %in% keys(rhash))
{
rhash[[ress[1]]][3]<- (as.numeric(rhash[[ress[1]]][3]) + as.numeric(ress[3]))
if(stri_length(rhash[[ress[1]]][4])>stri_length(expr))
rhash[[ress[1]]][4]<-expr
}
else
{
rhash[[ress[2]]][3]<- (as.numeric(rhash[[ress[2]]][3]) + as.numeric(ress[3]))
if(stri_length(rhash[[ress[2]]][4])>stri_length(expr))
rhash[[ress[2]]][4]<-expr
}
}
}
res<-as.data.frame(t(values(rhash)[c(3,4),]))
res$V1<-as.numeric(as.character(res$V1))
res<-res[which(res$V1>thf),]
res<-res[order(res$V1, decreasing = T),]
clear(rhash)
rm(rhash)
res[which(res[,1]>1),1]<-1
colnames(res)<-c("posterior","tree")
return(res)
}
# proceed experiment 1
X<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/X1.csv")[,-1]
posteriors<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/sim1post.csv",stringsAsFactors = F)
th<-(10)^(-5)
thf<-0.05
res1<-simplifyposteriors(X,posteriors, th,thf)
write.csv(x =res1,row.names = F,file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/post1eta.csv")
# proceed experiment 2
X<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/X2.csv")[,-1]
posteriors<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/sim2post.csv",stringsAsFactors = F)
th<-(10)^(-5)
thf<-0.05
res1<-simplifyposteriors(X,posteriors, th,thf)
write.csv(x =res1,row.names = F,file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/post2eta.csv")
# proceed experiment 3
X<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/X3.csv")[,-1]
posteriors<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/sim3post.csv",stringsAsFactors = F)
th<-(10)^(-5)
thf<-0.05
res1<-simplifyposteriors(X,posteriors, th,thf)
write.csv(x =res1,row.names = F,file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/post3eta.csv")
# proceed experiment 4
X<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/X4.csv")[,-1]
posteriors<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/sim4post.csv",stringsAsFactors = F)
th<-(10)^(-5)
thf<-0.05
res1<-simplifyposteriors(X,posteriors, th,thf)
write.csv(x =res1,row.names = F,file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/post4eta.csv")
# proceed experiment 5
X<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/X5.csv")[,-1]
posteriors<-read.csv(file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/sim5post.csv",stringsAsFactors = F)
th<-(10)^(-5)
thf<-0.05
res1<-simplifyposteriors(X,posteriors, th,thf)
write.csv(x =res1,row.names = F,file = "/mn/sarpanitu/ansatte-u2/aliaksah/Desktop/package/EMJMCMC/examples/QTL logic regression/post5eta.csv")
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